Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787503.1_cds_XP_016500745.1_150
CDS Infomation

[gene=LOC107819093] [db_xref=GeneID:107819093] [protein=DNA repair helicase XPB1-like] [protein_id=XP_016500745.1] [location=join(554..608,703..896,1934..2097,2206..2278,2690..2803,3155..3235,3349..3408,3514..3597,3704..3846,4011..4098)] [gbkey=CDS]
Sequence

ATGTTTCGAAAGGTCATTAGTATCACGAAATCACACTGCAAACTTGGGCTTACAGCTACG
CTTGTCAGAGAAGACGAGAGAATTACAGATTTGAACTTTCTTATTGGTCCAAAGTTGTAT
GAAGCAAATTGGTTGGATTTAGTGAAAGGAGGATTTATTGCAAATGTGCAATGTGCTGAG
GTGTGGTGTCCAATGACTAAGGAGTTCTTTGCTGAATATCTGAAAAAAGAAAATTCAAAG
AAGCGGCAAGCACTTTATGTGATGAACCCAAACAAGTTCAGGGCTTGCGAGTTTCTTATC
CGTTTTCATGAGCAGCAGCGTGGGGACAAGATAATTGTATTTGCGGACAATCTTTTTGCA
CTTACAGAGTATGCGATGAAGCTTCGCAAACCTATGATTTATGGTGCTACCAGCCATGTT
GAAAGAACAAAAATTCTTGAGGCATTTAAAACAAGCAAGGAAGTTAACACCGTATTCCTA
TCCAAGGTCGGTGATAACTCCATTGATATTCCTGAGGCGAATGTTATAATTCAAATTTCG
TCACATGCTGGTTCAAGACGACAAGAAGCTCAACGTCTAGGGCGTATTCTCAGGGCCAAG
GGGCGCCATCAAGATAGGGTGGCAGGAGGTAAAGAGGAGTATAATGCGTTCTTTTACTCC
CTTGTGTCAACAGATACCCAGGAAATGTACTACTCAACCAAAAGGCAGCAATTCTTGATT
GATCAAGGTTATAGCTTTAAGGTGATCACAAGCTTGCCACCTCCTGATTCTGGGCCTGAG
TTAAGCTATCACCGTCTTGATGACCAGCTTCAACTTCTTGGAAAGGTATTGAATGCTGGC
GATGATGCGGTCGGCTTGGAGCAGCTAGACGAAGATGCAGATGATATAGCTCTTCAAAAA
GCCCGTCGCTACGTGGGTTCTATGAGTGCCATGTCAGGAGCAAAAGGGATGGTTTATATG
GAATACAACACTGGAAAGAAGCAGGGAGGCCTTATTAAAAGCAAGCCTAAAGATCCAGCC
AAGAGACATCAGTTATTCAAAAAACGCTTTGGTTGA

Peptide Sequence

PEP ID

XP_016500745.1
PEP Infomation

PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
Sequence

MFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAE
VWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFA
LTEYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQIS
SHAGSRRQEAQRLGRILRAKGRHQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLI
DQGYSFKVITSLPPPDSGPELSYHRLDDQLQLLGKVLNAGDDAVGLEQLDEDADDIALQK
ARRYVGSMSAMSGAKGMVYMEYNTGKKQGGLIKSKPKDPAKRHQLFKKRFG

Transcript Sequence

Gene sequence data has not been registered.